emodel_generalisation

Emodel generalisation package.

Functions

load_mechanisms([mech_path])

Load mechanisms if present in TMPDIR.

emodel_generalisation.load_mechanisms(mech_path=None)

Load mechanisms if present in TMPDIR.

Modules

adaptation

Module to adapt AIS/soma scale by matching rho factors.

bluecellulab_evaluator

Compute the threshold and holding current using bluecellulab, adapted from BluePyThresh.

cli

Cli app.

exemplars

"Module to create exemplar morphologies from a morphological population.

information

Module to compute information theory on mcmc sampling of emodels.

mcmc

Module to sample electrical model parameter space with MCMC.

model

Module to evaluate a single model, adapted from BluePyEmodel software (to be open sourced).

morph_utils

Morphology related utils functions.

select

Module to select valid pairs of morphologies and electrical models.

tasks

Workflow.

utils

Other util functions.

validation

"Module for Validation of electrical models.

version

Package version.